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Phys. The updating operation repeated until reaching the stop condition. A. Epub 2022 Mar 3. Lambin, P. et al. Computed tomography (CT) and magnetic resonance imaging (MRI) represent valuable input to AI algorithms, scanning human body sections for the sake of diagnosis. Number of extracted feature and classification accuracy by FO-MPA compared to other CNNs on dataset 1 (left) and on dataset 2 (right). & Mirjalili, S. Slime mould algorithm: A new method for stochastic optimization. Nevertheless, a common mistake in COVID-19 dataset fusion, mainly on classification tasks, is that by mixing many datasets of COVID-19 and using as Control images another dataset, there will be . In this paper, a new ML-method proposed to classify the chest x-ray images into two classes, COVID-19 patient or non-COVID-19 person. I am passionate about leveraging the power of data to solve real-world problems. Syst. The evaluation confirmed that FPA based FS enhanced classification accuracy. Table2 shows some samples from two datasets. They were also collected frontal and lateral view imagery and metadata such as the time since first symptoms, intensive care unit (ICU) status, survival status, intubation status, or hospital location. Mutation: A mutation refers to a single change in a virus's genome (genetic code).Mutations happen frequently, but only sometimes change the characteristics of the virus. Stage 1: After the initialization, the exploration phase is implemented to discover the search space. 41, 923 (2019). Blog, G. Automl for large scale image classification and object detection. & Baby, C.J. Emphysema medical image classification using fuzzy decision tree with fuzzy particle swarm optimization clustering. The proposed cascaded system is proposed to segment the lung, detect, localize, and quantify COVID-19 infections from computed tomography images, which can reliably localize infections of various shapes and sizes, especially small infection regions, which are rarely considered in recent studies. (15) can be reformulated to meet the special case of GL definition of Eq. The COVID-19 pandemic has been having a severe and catastrophic effect on humankind and is being considered the most crucial health calamity of the century. Figure6 shows a comparison between our FO-MPA approach and other CNN architectures. Huang, P. et al. They used K-Nearest Neighbor (kNN) to classify x-ray images collected from Montgomery dataset, and it showed good performances. Google Scholar. In some cases (as exists in this work), the dataset is limited, so it is not sufficient for building & training a CNN. medRxiv (2020). CNNs are more appropriate for large datasets. Marine memory: This is the main feature of the marine predators and it helps in catching the optimal solution very fast and avoid local solutions. Accordingly, the FC is an efficient tool for enhancing the performance of the meta-heuristic algorithms by considering the memory perspective during updating the solutions. Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations. Med. J. The predator tries to catch the prey while the prey exploits the locations of its food. Zhang et al.16 proposed a kernel feature selection method to segment brain tumors from MRI images. Google Scholar. In this paper, each feature selection algorithm were exposed to select the produced feature vector from Inception aiming at selecting only the most relevant features. 4 and Table4 list these results for all algorithms. In Inception, there are different sizes scales convolutions (conv. Covid-19 Classification Using Deep Learning in Chest X-Ray Images Abstract: Covid-19 virus, which has emerged in the Republic of China in an undetermined cause, has affected the whole world quickly. what medical images are commonly used for COVID-19 classification and what are the methods for COVID-19 classification. Table3 shows the numerical results of the feature selection phase for both datasets. FCM reinforces the ANFIS classification learning phase based on the features of COVID-19 patients. Faramarzi et al.37 implement this feature via saving the previous best solutions of a prior iteration, and compared with the current ones; the solutions are modified based on the best one during the comparison stage. Convolutional neural networks were implemented in Python 3 under Google Colaboratory46, commonly referred to as Google Colab, which is a research project for prototyping machine learning models on powerful hardware options such as GPUs and TPUs. The 30-volume set, comprising the LNCS books 12346 until 12375, constitutes the refereed proceedings of the 16th European Conference on Computer Vision, ECCV 2020, which was planned to be held in Glasgow, UK, during August 23-28, 2020. Propose similarity regularization for improving C. Pool layers are used mainly to reduce the inputs size, which accelerates the computation as well. Sahlol, A. T., Kollmannsberger, P. & Ewees, A. \(\bigotimes\) indicates the process of element-wise multiplications. Scientific Reports Volume 10, Issue 1, Pages - Publisher. Tensorflow: Large-scale machine learning on heterogeneous systems, 2015. Inception architecture is described in Fig. Whereas the worst one was SMA algorithm. (23), the general formulation for the solutions of FO-MPA based on FC memory perspective can be written as follows: After checking the previous formula, it can be detected that the motion of the prey becomes based on some terms from the previous solutions with a length of (m), as depicted in Fig. a cough chills difficulty breathing tiredness body aches headaches a new loss of taste or smell a sore throat nausea and vomiting diarrhea Not everyone with COVID-19 develops all of these. It also shows that FO-MPA can select the smallest subset of features, which reflects positively on performance. To survey the hypothesis accuracy of the models. As Inception examines all X-ray images over and over again in each epoch during the training, these rapid ups and downs are slowly minimized in the later part of the training. The MCA-based model is used to process decomposed images for further classification with efficient storage. Google Scholar. The name "pangolin" comes from the Malay word pengguling meaning "one who rolls up" from guling or giling "to roll"; it was used for the Sunda pangolin (Manis javanica). PVT-COV19D: COVID-19 Detection Through Medical Image Classification Based on Pyramid Vision Transformer. However, it was clear that VGG19 and MobileNet achieved the best performance over other CNNs. Support Syst. In this subsection, a comparison with relevant works is discussed. Initialize solutions for the prey and predator. D.Y. Objective: Lung image classification-assisted diagnosis has a large application market. Isolation and characterization of a bat sars-like coronavirus that uses the ace2 receptor. Automatic CNN-based Chest X-Ray (CXR) image classification for detecting Covid-19 attracted so much attention. Chollet, F. Keras, a python deep learning library. PVT-COV19D: COVID-19 Detection Through Medical Image Classification Based on Pyramid Vision Transformer. JMIR Formative Research - Classifying COVID-19 Patients From Chest X-ray Images Using Hybrid Machine Learning Techniques: Development and Evaluation Published on 28.2.2023 in Vol 7 (2023) Preprints (earlier versions) of this paper are available at https://preprints.jmir.org/preprint/42324, first published August 31, 2022 . Luz, E., Silva, P.L., Silva, R. & Moreira, G. Towards an efficient deep learning model for covid-19 patterns detection in x-ray images. Med. Math. After feature extraction, we applied FO-MPA to select the most significant features. Faramarzi, A., Heidarinejad, M., Mirjalili, S. & Gandomi, A. H. Marine predators algorithm: a nature-inspired metaheuristic. More so, a combination of partial differential equations and deep learning was applied for medical image classification by10. Imaging 35, 144157 (2015). Int. Narayanan, S.J., Soundrapandiyan, R., Perumal, B. Propose a novel robust optimizer called Fractional-order Marine Predators Algorithm (FO-MPA) to select efficiently the huge feature vector produced from the CNN. All authors discussed the results and wrote the manuscript together. & Cmert, Z. Objective: To help improve radiologists' efficacy of disease diagnosis in reading computed tomography (CT) images, this study aims to investigate the feasibility of applying a modified deep learning (DL) method as a new strategy to automatically segment disease-infected regions and predict disease severity. & Cmert, Z. Efficient classification of white blood cell leukemia with improved swarm optimization of deep features. The code of the proposed approach is also available via the following link [https://drive.google.com/file/d/1-oK-eeEgdCMCnykH364IkAK3opmqa9Rvasx/view?usp=sharing]. In this paper, we used TPUs for powerful computation, which is more appropriate for CNN. Keywords - Journal. For the special case of \(\delta = 1\), the definition of Eq. We build the first Classification model using VGG16 Transfer leaning framework and second model using Deep Learning Technique Convolutional Neural Network CNN to classify and diagnose the disease and we able to achieve the best accuracy in both the model. Eng. Image Anal. used a dark Covid-19 network for multiple classification experiments on Covid-19 with an accuracy of 87% [ 23 ]. By achieving 98.7%, 98.2% and 99.6%, 99% of classification accuracy and F-Score for dataset 1 and dataset 2, respectively, the proposed approach outperforms several CNNs and all recent works on COVID-19 images. 79, 18839 (2020). 6 (left), for dataset 1, it can be seen that our proposed FO-MPA approach outperforms other CNN models like VGGNet, Xception, Inception, Mobilenet, Nasnet, and Resnet. Use of chest ct in combination with negative rt-pcr assay for the 2019 novel coronavirus but high clinical suspicion. Radiology 295, 2223 (2020). Also, all other works do not give further statistics about their models complexity and the number of featurset produced, unlike, our approach which extracts the most informative features (130 and 86 features for dataset 1 and dataset 2) that imply faster computation time and, accordingly, lower resource consumption. 132, 8198 (2018). 111, 300323. This dataset consists of 219 COVID-19 positive images and 1341 negative COVID-19 images. 152, 113377 (2020). Contribute to hellorp1990/Covid-19-USF development by creating an account on GitHub. In this paper, we apply a convolutional neural network (CNN) to extract features from COVID-19 X-Ray images. It noted that all produced feature vectors by CNNs used in this paper are at least bigger by more than 300 times compared to that produced by FO-MPA in terms of the size of the featureset. So, there might be sometimes some conflict issues regarding the features vector file types or issues related to storage capacity and file transferring. AMERICAN JOURNAL OF EMERGENCY MEDICINE COVID-19: Facemask use prevalence in international airports in Asia, Europe and the Americas, March 2020 The main purpose of Conv. Hence, it was discovered that the VGG-16 based DTL model classified COVID-19 better than the VGG-19 based DTL model. HGSO was ranked second with 146 and 87 selected features from Dataset 1 and Dataset 2, respectively. By submitting a comment you agree to abide by our Terms and Community Guidelines. Softw. For Dataset 2, FO-MPA showed acceptable (not the best) performance, as it achieved slightly similar results to the first and second ranked algorithm (i.e., MPA and SMA) on mean, best, max, and STD measures. For fair comparison, each algorithms was performed (run) 25 times to produce statistically stable results.The results are listed in Tables3 and4. Med. Cauchemez, S. et al. Mobilenets: Efficient convolutional neural networks for mobile vision applications. Sci. Coronavirus Disease (COVID-19): A primer for emergency physicians (2020) Summer Chavez et al. Layers are applied to extract different types of features such as edges, texture, colors, and high-lighted patterns from the images. Eng. Book Fractional Differential Equations: An Introduction to Fractional Derivatives, Fdifferential Equations, to Methods of their Solution and Some of Their Applications Vol. 43, 302 (2019). 2022 May;144:105350. doi: 10.1016/j.compbiomed.2022.105350. Initialization phase: this phase devotes for providing a random set of solutions for both the prey and predator via the following formulas: where the Lower and Upper are the lower and upper boundaries in the search space, \(rand_1\) is a random vector \(\in\) the interval of (0,1). Comput. MRFGRO: a hybrid meta-heuristic feature selection method for screening COVID-19 using deep features, Detection and analysis of COVID-19 in medical images using deep learning techniques, Cov-caldas: A new COVID-19 chest X-Ray dataset from state of Caldas-Colombia, Deep learning in veterinary medicine, an approach based on CNN to detect pulmonary abnormalities from lateral thoracic radiographs in cats, COVID-Net: a tailored deep convolutional neural network design for detection of COVID-19 cases from chest X-ray images, ANFIS-Net for automatic detection of COVID-19, A multi-scale gated multi-head attention depthwise separable CNN model for recognizing COVID-19, Validating deep learning inference during chest X-ray classification for COVID-19 screening, Densely attention mechanism based network for COVID-19 detection in chest X-rays, https://www.who.int/emergencies/diseases/novel-coronavirus-2019/situation-reports/, https://github.com/ieee8023/covid-chestxray-dataset, https://stanfordmlgroup.github.io/projects/chexnet, https://www.kaggle.com/paultimothymooney/chest-xray-pneumonia, https://www.sirm.org/en/category/articles/covid-19-database/, https://drive.google.com/file/d/1-oK-eeEgdCMCnykH364IkAK3opmqa9Rvasx/view?usp=sharing, https://doi.org/10.1016/j.irbm.2019.10.006, https://research.googleblog.com/2017/11/automl-for-large-scaleimage.html, https://doi.org/10.1016/j.engappai.2020.103662, https://www.sirm.org/category/senza-categoria/covid-19/, https://doi.org/10.1016/j.future.2020.03.055, http://creativecommons.org/licenses/by/4.0/, Skin cancer detection using ensemble of machine learning and deep learning techniques, Plastic pollution induced by the COVID-19: Environmental challenges and outlook, An Inclusive Survey on Marine Predators Algorithm: Variants andApplications, A Multi-strategy Improved Outpost and Differential Evolution Mutation Marine Predators Algorithm for Global Optimization, A light-weight convolutional Neural Network Architecture for classification of COVID-19 chest X-Ray images. This study presents an investigation on 16 pretrained CNNs for classification of COVID-19 using a large public database of CT scans collected from COVID-19 patients and non-COVID-19 subjects. If the random solution is less than 0.2, it converted to 0 while the random solution becomes 1 when the solutions are greater than 0.2. Vis. Johnson et al.31 applied the flower pollination algorithm (FPA) to select features from CT images of the lung, to detect lung cancers. The dataset consists of 21,165 chest X-ray (CXR) COVID-19 images distributed on four categories which are COVID19, lung opacity, viral pneumonia, and NORMAL (Non-COVID). The proposed approach was evaluated on two public COVID-19 X-ray datasets which achieves both high performance and reduction of computational complexity. Zhang, N., Ruan, S., Lebonvallet, S., Liao, Q. \(\Gamma (t)\) indicates gamma function. The experimental results and comparisons with other works are presented inResults and discussion section, while they are discussed in Discussion section Finally, the conclusion is described in Conclusion section. Introduction In 2018 IEEE International Symposium on Circuits and Systems (ISCAS), 15 (IEEE, 2018). Besides, the binary classification between two classes of COVID-19 and normal chest X-ray is proposed. \(Fit_i\) denotes a fitness function value. Deep learning plays an important role in COVID-19 images diagnosis. Sahlol, A.T., Yousri, D., Ewees, A.A. et al. They used different images of lung nodules and breast to evaluate their FS methods. For this motivation, we utilize the FC concept with the MPA algorithm to boost the second step of the standard version of the algorithm. In Medical Imaging 2020: Computer-Aided Diagnosis, vol. In the last two decades, two famous types of coronaviruses SARS-CoV and MERS-CoV had been reported in 2003 and 2012, in China, and Saudi Arabia, respectively3. How- individual class performance. The data was collected mainly from retrospective cohorts of pediatric patients from Guangzhou Women and Childrens medical center. TOKYO, Jan 26 (Reuters) - Japan is set to downgrade its classification of COVID-19 to that of a less serious disease on May 8, revising its measures against the coronavirus such as relaxing. The proposed IMF approach successfully achieves two important targets, selecting small feature numbers with high accuracy. Future Gener. It classifies the chest X-ray images into three categories that includes Covid-19, Pneumonia and normal. The results are the best achieved on these datasets when compared to a set of recent feature selection algorithms. Furthermore, the proposed GRAY+GRAY_HE+GRAY_CLAHE image representation was evaluated on two different datasets, SARS-CoV-2 CT-Scan and New_Data_CoV2, where it was found to be superior to RGB . However, the modern name is tenggiling.In Javanese it is terenggiling; and in the Philippine languages, it is goling, tanggiling, or balintong (with the same meaning).. The algorithm combines the assessment of image quality, digital image processing and deep learning for segmentation of the lung tissues and their classification. They also used the SVM to classify lung CT images. In this experiment, the selected features by FO-MPA were classified using KNN. A deep feature learning model for pneumonia detection applying a combination of mRMR feature selection and machine learning models. Besides, the used statistical operations improve the performance of the FO-MPA algorithm because it supports the algorithm in selecting only the most important and relevant features. Toaar, M., Ergen, B. In 2019 26th National and 4th International Iranian Conference on Biomedical Engineering (ICBME), 194198 (IEEE, 2019). However, using medical imaging, chest CT, and chest X-ray scan can play a critical role in COVID-19 diagnosis. According to the promising results of the proposed model, that combines CNN as a feature extractor and FO-MPA as a feature selector could be useful and might be successful in being applied in other image classification tasks. Softw. Sign up for the Nature Briefing newsletter what matters in science, free to your inbox daily. This combination should achieve two main targets; high performance and resource consumption, storage capacity which consequently minimize processing time. Based on Standard Deviation measure (STD), the most stable algorithms were SCA, SGA, BPSO, and bGWO, respectively. Among the FS methods, the metaheuristic techniques have been established their performance overall other FS methods when applied to classify medical images. Regarding the consuming time as in Fig. Article Article In the current work, the values of k, and \(\zeta\) are set to 2, and 2, respectively. J. Clin. Also, image segmentation can extract critical features, including the shape of tissues, and texture5,6. and pool layers, three fully connected layers, the last one performs classification. MPA simulates the main aim for most creatures that is searching for their foods, where a predator contiguously searches for food as well as the prey. Memory FC prospective concept (left) and weibull distribution (right). Purpose The study aimed at developing an AI . (2) To extract various textural features using the GLCM algorithm. So, transfer learning is applied by transferring weights that were already learned and reserved into the structure of the pre-trained model, such as Inception, in this paper. Duan, H. et al. In this work, the MPA is enhanced by fractional calculus memory feature, as a result, Fractional-order Marine Predators Algorithm (FO-MPA) is introduced. This algorithm is tested over a global optimization problem. (iii) To implement machine learning classifiers for classification of COVID and non-COVID image classes. COVID-19 is the most transmissible disease, caused by the SARS-CoV-2 virus that severely infects the lungs and the upper respiratory tract of the human body.This virus badly affected the lives and wellness of millions of people worldwide and spread widely. Lett. (24). In ancient India, according to Aelian, it was . MATH Wish you all a very happy new year ! https://www.sirm.org/category/senza-categoria/covid-19/ (2020). The different proposed models will be trained with three-class balanced dataset which consists of 3000 images, 1000 images for each class. Havaei, M. et al. Classification Covid-19 X-Ray Images | by Falah Gatea | Medium 500 Apologies, but something went wrong on our end. A.T.S. Some people say that the virus of COVID-19 is. (1): where \(O_k\) and \(E_k\) refer to the actual and the expected feature value, respectively. (20), \(FAD=0.2\), and W is a binary solution (0 or 1) that corresponded to random solutions. & Mahmoud, N. Feature selection based on hybrid optimization for magnetic resonance imaging brain tumor classification and segmentation.